Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907261.1_cds_XP_016457396.1_51126
CDS Infomation

[gene=LOC107781238] [db_xref=GeneID:107781238] [protein=protein JASON-like] [protein_id=XP_016457396.1] [location=join(42327..42524,43191..43245,43364..43461,44993..45237,45444..46281,46407..46489,46906..46984)] [gbkey=CDS]
Sequence

ATGTTATGGTCAAGGTTACCTTCCGCCGAAGAACTTAATTATCCGAAAAATCGCGATATC
GTTGGAGTGTTTAGGGCACTGGTTGTCGCCGCCATGGGATGTCTATTCGGTTGTTTTCGT
ATCAAGGATGGTTCTCTTCCTCCTGCTCCTTGCTCCGATCCTAAATCTCATCTCGTCTCC
CAGTCTATATCTACTAAGGAACCTGTAGTATCTCGCAACAGGAGTCCATTATCTTCACTT
TTTATTTCTGAAGAAAAAGGCGAGGATGATGATTTGCACCAAACTGAAATGGATAAGCAA
GACACAGGAACACCTAAGTCTGAGTTGGATGCGAAAGAGCTCAGGGATCAGGCCAAGTTT
CTTAAAGCTTGTGGAACCTTACCTGAGACTCCTGCTGAAATTCGGAAAGGCTTGGTGAAA
CGCAAAGATCTATCAACTCCAACTGGAGATGTTGAACCTTTAAAATTCAAGTCTTGGCTC
TCTGATATGGCTGTTCAAGAGCTCAACCTGAATTTGCCACCTGAGGACCCGATTACACCT
AGTAAAAGCAATGGACTGGAAAAACATTCTGGTTCCTTGGCACGTTCACCTAGCAGCTGC
ATGATGGATGGACACAATAGTCAAAGTTTGTCGAAAAGCTCTATTCATGGTAGTGGGTCT
TCTAACACTCCGGCATCCATTAAGGTTAATGCTAATCAGACTCATAAAGACATAGCTTCG
GAAGTTACACCAACATTTGCTCCCAGTGCCCTGTACATGAACAAATCTGTTCGTTTTGAC
TGTGAGTCCGATCTATCTGCAGTATCATGCAAAAGTTCTTCATCGACACTTGACAGTCAA
AACGCAAAGCAGCCTGGCAATTCCTATGCATTGAAAAATTCTCCCTATCCAACCCCCCTA
AAACTAAGTGATGAAATGCAAACACCTGGAACTGTTTTTCCGGCATATTTAGACAACATT
GCAAATGGAAAAACTGCAAGGATCAGGTCTCAGTTTGTTTATCCAGTGTTAAACCCTGTT
TATAGCGCATCACAGTTAAAGGAATTGTCAGATGAAGATTCCTACTCCATTCTAGATTCT
AGTTCCATATTATTGTCTAGTAACATGACAGAATCTGGTGAATGGCCAAATGAAGCAAGC
TTTTCGTCAGAACAAGGAATGTCTGGGTTAAAAGAAGCTTCAGCTGATAAAGATTCAAAG
GTAGAAGCAAGCTTGTCTTCGTGGCTGAAACCATCTTCAATCAATCAAGATGAGGGTAAG
CAGCATAATGGTTCAGTTTATGGTGACAATGTTCATTATGGCAGAACTCCTGGAGATAGG
CCTATTCTTGGGTTGGTTGCTGCTCACTGGAAAGATGATGAAAATTCTCATATATCTCCT
AAAAAATGGTGGGATGGAAACGGGATTCCTAATTCAACAAACAAGTATAAGGAGGATCAG
AAAGTAAGTTGGCATGCAACACCATTTGAAGAGAGACTGGAGAAGGCATTATCACAAGAA
ACTTCCATTTCACAAAGGAAGCAATTCAGTGGGACAACACCAATTACCTTTAATGAAACT
GAGGAATCAGATACTGCTCACTCGCAAGTGCACTAA

Peptide Sequence

PEP ID

XP_016457396.1
PEP Infomation

PREDICTED: protein JASON-like [Nicotiana tabacum]
Sequence

MLWSRLPSAEELNYPKNRDIVGVFRALVVAAMGCLFGCFRIKDGSLPPAPCSDPKSHLVS
QSISTKEPVVSRNRSPLSSLFISEEKGEDDDLHQTEMDKQDTGTPKSELDAKELRDQAKF
LKACGTLPETPAEIRKGLVKRKDLSTPTGDVEPLKFKSWLSDMAVQELNLNLPPEDPITP
SKSNGLEKHSGSLARSPSSCMMDGHNSQSLSKSSIHGSGSSNTPASIKVNANQTHKDIAS
EVTPTFAPSALYMNKSVRFDCESDLSAVSCKSSSSTLDSQNAKQPGNSYALKNSPYPTPL
KLSDEMQTPGTVFPAYLDNIANGKTARIRSQFVYPVLNPVYSASQLKELSDEDSYSILDS
SSILLSSNMTESGEWPNEASFSSEQGMSGLKEASADKDSKVEASLSSWLKPSSINQDEGK
QHNGSVYGDNVHYGRTPGDRPILGLVAAHWKDDENSHISPKKWWDGNGIPNSTNKYKEDQ
KVSWHATPFEERLEKALSQETSISQRKQFSGTTPITFNETEESDTAHSQVH

Transcript Sequence

Gene sequence data has not been registered.